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In my Visual Studio SSIS Project, I've added my SCD Merge Wizard (.mwpxml) files as Miscellaneous files. I've tried using Visual Studio to open them, directing it to use the ScdMergeWizard_1.1.exe.
This does succeed in launching the ScdMergeWizard_1.1 module, but doesn't open the file.
This is obviously a minor issue - the easy workaround is to hit the Open button and pick from the directory.